Does anyone know of a good index or batch file code decoders?
In particular, for PHP, JS and SGML languages.
Preferably with style settings.
The following page has code to remove Javascript (also written in javascript):
http://www.howtocreate.co.uk/tutorials/jsexamples/JSTidy.html
There are various ways to organize files based on SGML (i.e. XML). HTMLTidy often does the trick, and in different languages there are various implementations of "pretty printed".
And finally, a link to a website with PHP code for pretty typing PHP: http://tobyinkster.co.uk/blog/2007/07/17/php-pretty-printer/
For HTML / XML, HTML Tidy is the best option:
http://tidy.sourceforge.net/
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