That the author refers (in a certain sense imho) is an internal representation of objects. They all represent some type of “list” with additional bits of information that determine how R works with it.
Take, for example, the matrix. The matrix is a vector with an additional attribute called "dim." It is this attribute that makes it the matrix. Removing the attribute shows the basic structure of the vector:
> x <- matrix(1:10, ncol = 5)
> x
[,1] [,2] [,3] [,4] [,5]
[1,] 1 3 5 7 9
[2,] 2 4 6 8 10
> attributes(x)
$dim
[1] 2 5
> attr(x,"dim") <- NULL
> x
[1] 1 2 3 4 5 6 7 8 9 10
, , . S3, - . "class".
S3 - : , . , print()
, summary()
.., .
, . :
> class(iris)
[1] "data.frame"
> attributes(iris)
$names
[1] "Sepal.Length" "Sepal.Width" "Petal.Length" "Petal.Width" "Species"
$row.names
[1] 1 2 3 4 5 ...
$class
[1] "data.frame"
> class(iris) <- NULL
> class(iris)
[1] "list"
S3 "class". , , , "lm". .
S4, . S4 , , "" "". , , , S3. S4 , , , , , S4.
: R. : . , . , . , . " ", , , .