I'm going to guess here because you did not tell us which fields or indexes you have, and you did not specify the number of rows in each table. (So ββit could be trash).
varMeta.html_varcontent, varMeta.projectID. (html_varcontent, projectID) varMeta. ? , MySQL . MySQL , , . .
, ORDER BY id DESC LIMIT 1 runList. , (appName, id) runList. appName, id. .
, projectList : (id, appName) (appName, id). , MySQL , .