To conclude, as you deduced, you can set the R working directory on the command line as follows:
setwd ("~ / NateProjects")
You can also use the RStudio Files panel to navigate to the directory, and then set it as the working directory from the menu: Session → Set working directory → In the “File panel” field. (There you will see even more options). Or, in the Files area, select More and Install as Working Directory.
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