I basically have a fixed title and content area with lots of 3D transformations using Isotope
<header style="position: fixed; top: 0; left: 0"> </header> <div class="isotope">
I have a fiddle here - http://jsfiddle.net/jzT2L/3/
The violin looks fine, but if you copy the html "result" from the iframe and start as a document in Chrome / Canary, you will see this problem.
It also helps if you enable the "Complex borders of the rendering layer" in chrome: // flags /
Basically, when you scroll and the fixed title is above the 3D layer, chrome also makes it a three-dimensional layer and breaks the style / layout 
Note that the fixed header is now fanned out and has become a three-dimensional layer
The same thing works fine in FF, IE, etc. Is this a known bug and what can I do to stop it?
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