Where to place a Python script that performs bioinformatics analysis?

I wrote an analytic pipeline in Python that I think will be useful to other people. I'm wondering if publishing such scripts publicly on GitHub, is there room for this for Python scripts, or even if there is a more specific place for biology related Python scripts.

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You can also publish it on sourceforge . All types of scientific, engineering, etc. Scripts are posted, and millions of people download these scripts. Github is also a good choice, but I believe that sourceforge is more popular among viewers and in downloads. In addition, you can publish the openwetware wiki and publish the code there, openwetware is a wiki system for scientific use, I used it before and recommend it. Or you can link the two large open source platforms, sourceforge and github by mirroring, so that your project is essentially “synchronized” on both platforms: Check this out:

http://www.17od.com/2010/11/11/migrating-a-sourceforge-subversion-repository-to-github/ -review http://www.xcore.com/forum/viewtopic.php?f= 3 & t = 162 - as a mirror actually

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Although there are many approaches to this, one of the usual solutions would be to really post it on github and then link to it from your research institution website.

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Another option is to publish it on bioinformatics.org .

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Source: https://habr.com/ru/post/1445679/


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