After this question, it seems that you can open the file from the shell from IntelliJ to MAC.
IntelliJ: how to open files in an existing IntelliJ from the command line
Is there something similar for Ubuntu?
You can link the files to the IDEA_DIR/bin/idea.sh . Or even better, use Tools | Create a command line launcher ...
IDEA_DIR/bin/idea.sh
Tools
You can then open the files in IDEA using the following command: idea FileName.java
idea FileName.java
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