Make sure debug = "true" is removed from your web.config file:
Edit
<system.web> <compilation debug="true" targetFramework="4.0">
to
<system.web> <compilation debug="false" targetFramework="4.0">
It doesn't matter if you create your code in Debug or Release - Rejuicer respects the debugging setting of web.config, as it should be. If this parameter is set to true, Rejuicer will not minimize and merge files. It does this in such a way that you can debug your scripts using non-minified files in local operation.
When you click your code in Production, your web.config.release conversion will run and remove the debug = "true" attribute from your web.config file so that your files are always minimized in production scripts.
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