In weka explorer, you can perform data clustering and then use visualization to save a new arff file with the cluster as attributes.
Is there a way to do this automatically by calling executables on the command line?
If anyone else has this problem, you can try using weka.filters.unsupervised.attribute.AddCluster. The -W argument should contain your clustering algorithm, and you can use -i and -o, like any other filter, to save the new arff.
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