I had this problem and through this post a google search query appeared (after a year). I am also on a shared host and pull my hair over the stop words set in mysql. I found a workaround that works great for me, hope this can be useful to others as well.
You can also use the REGEXP command to match the search query in your table.
SELECT * FROM table WHERE column REGEXP 'searchterm'
How do I implement this by first creating MATCH AGAINST syntax, if count = 0, I do REGEXP , instead providing my users with more results. Better than no results due to stop words and minimum length.
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