Gephi and NetworkX return different average clustering rates for the same graph

Question

I calculated the average clustering coefficient using both Gephi and NetworkX. For the same graph, NetworkX gave 0.2399, and Gephi - 0.644.

1. Why is this different?
2. How do NetworkX and Gephi calculate average clustering?
3. In particular, in case of disconnection of components; how do NetworkX and Gephi calculate the odds?

Answer 1

just mention that networkx average_clustering has a parameter called count_zeros . middle_cluster documentation

Its default value is True, which means that it will consider a node with zero clustering. You can set it to False and see if it returns the same value as Gephi.